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Species belonging to selected taxon:

Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008495
species: Sorghum bicolor
miRNA family: MIRf1158
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCATTTGGAACGTGTAATTTT

miRNA*
AATTCCTACGTTCCAAACGGGT

mismatches: 2
bulges: 1

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pre-miRNA
ACATGAAGGCTCCATTTGGAACGTGTAATTTTTTTTGTTCCTGTGTTGTTTCTACAAAAAATAAAATAAATCCTAAAAAAACTATGGAATTCCAGTGAAA
TTCCTACGTTCCAAACGGGT
CCAAATAT


dot-bracket secondary structure
.......((.(((.(((((((((((.((((((.((.(((((...(((.(((........................))).)))...)))))...)).))))
))..))))))))))).))).
))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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